STRINGSTRING
AFY21797.1 AFY21797.1 pqiA1 pqiA1 pqiA2 pqiA2 AFY19964.1 AFY19964.1 AFY19963.1 AFY19963.1 AFY19966.1 AFY19966.1 AFY17640.1 AFY17640.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21797.1[R] COG3008 Paraquat-inducible protein B. (767 aa)    
Predicted Functional Partners:
pqiA1
[S] COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.954
pqiA2
[S] COG2995 Uncharacterized paraquat-inducible protein A.
  
 0.953
AFY19964.1
[S] COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.808
AFY19963.1
[S] COG2995 Uncharacterized paraquat-inducible protein A.
 
  
 0.801
AFY19966.1
Hypothetical protein.
 
   
 0.611
AFY17640.1
[S] COG3009 Uncharacterized protein conserved in bacteria.
 
   
 0.593
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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