rpsT protein (Pseudomonas sp. UW4) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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Score

rpsT

30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (92 aa)

Predicted Functional Partners:

rpmE

0.984

rpsO

0.983

rplM

0.983

rpmB

0.983

rpsP

0.982

rplU

0.982

rpsU

0.982

rpmF

0.981

rpmA

0.980

rpmH

0.978

Your Current Organism:

Pseudomonas sp. UW4

NCBI taxonomy Id: 1207075
Other names: P. sp. UW4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	PputUW4_04526	PputUW4_04676	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.986
rplM	rpmA	PputUW4_04526	PputUW4_04675	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplM	rpmB	PputUW4_04526	PputUW4_05321	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.982
rplM	rpmE	PputUW4_04526	PputUW4_00340	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L31; Binds the 23S rRNA.	0.977
rplM	rpmF	PputUW4_04526	PputUW4_04036	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.980
rplM	rpmH	PputUW4_04526	PputUW4_05443	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.964
rplM	rpsO	PputUW4_04526	PputUW4_00709	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rplM	rpsP	PputUW4_04526	PputUW4_04433	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988
rplM	rpsT	PputUW4_04526	PputUW4_04671	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.983
rplM	rpsU	PputUW4_04526	PputUW4_04950	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.978
rplU	rplM	PputUW4_04676	PputUW4_04526	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.986
rplU	rpmA	PputUW4_04676	PputUW4_04675	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplU	rpmB	PputUW4_04676	PputUW4_05321	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.983
rplU	rpmE	PputUW4_04676	PputUW4_00340	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	50S ribosomal protein L31; Binds the 23S rRNA.	0.982
rplU	rpmF	PputUW4_04676	PputUW4_04036	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.983
rplU	rpmH	PputUW4_04676	PputUW4_05443	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.980
rplU	rpsO	PputUW4_04676	PputUW4_00709	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.982
rplU	rpsP	PputUW4_04676	PputUW4_04433	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.984
rplU	rpsT	PputUW4_04676	PputUW4_04671	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.982
rplU	rpsU	PputUW4_04676	PputUW4_04950	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.979