STRINGSTRING
cydA2 cydA2 cydB2 cydB2 cydB1 cydB1 cydA1 cydA1 AFY21899.1 AFY21899.1 putA putA rubA rubA nuoH nuoH sdhB sdhB sdhC sdhC AFY19516.1 AFY19516.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
cydA2[C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (478 aa)    
Predicted Functional Partners:
cydB2
[C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 0.999
cydB1
[C] COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 
 0.969
cydA1
[C] COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
  
  
 
0.900
AFY21899.1
Hypothetical protein.
  
  
 0.827
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.689
rubA
Rubredoxin; [C] COG1773 Rubredoxin.
  
  
 0.610
nuoH
NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
     
 0.585
sdhB
[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
     
 0.585
sdhC
[C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
     
 0.580
AFY19516.1
Putative oxidoreductase; [C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
     
 0.554
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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