STRINGSTRING
AFY21912.1 AFY21912.1 AFY21913.1 AFY21913.1 aroE2 aroE2 AFY20128.1 AFY20128.1 pobA pobA AFY20528.1 AFY20528.1 AFY20169.1 AFY20169.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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[Homology]
Score
AFY21912.1[K] COG1309 Transcriptional regulator. (225 aa)    
Predicted Functional Partners:
AFY21913.1
[ER] COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
 
   
 0.876
aroE2
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
   
 0.568
AFY20128.1
NAD-dependent epimerase/dehydratase; [MG] COG0451 Nucleoside-diphosphate-sugar epimerases.
  
     0.494
pobA
4-hydroxybenzoate 3-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 
 
 0.489
AFY20528.1
[H] COG0684 Demethylmenaquinone methyltransferase.
  
     0.471
AFY20169.1
[S] COG2828 Uncharacterized protein conserved in bacteria.
  
     0.444
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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