STRINGSTRING
AFY21916.1 AFY21916.1 AFY18031.1 AFY18031.1 AFY20202.1 AFY20202.1 AFY21915.1 AFY21915.1 AFY21200.1 AFY21200.1 AFY21917.1 AFY21917.1 AFY21918.1 AFY21918.1 AFY21199.1 AFY21199.1 garD garD AFY17958.1 AFY17958.1 kdgK kdgK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21916.1[K] COG1414 Transcriptional regulator. (258 aa)    
Predicted Functional Partners:
AFY18031.1
[K] COG1414 Transcriptional regulator.
  
     0.769
AFY20202.1
[K] COG1414 Transcriptional regulator.
  
     0.765
AFY21915.1
Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.574
AFY21200.1
[E] COG2049 Allophanate hydrolase subunit 1.
  
    0.564
AFY21917.1
Hypothetical protein; [R] COG2321 Predicted metalloprotease.
       0.555
AFY21918.1
Hypothetical protein.
       0.555
AFY21199.1
[E] COG1984 Allophanate hydrolase subunit 2.
  
    0.497
garD
[G] COG2721 Altronate dehydratase.
 
  
 0.436
AFY17958.1
[K] COG2186 Transcriptional regulators.
 
  
 0.422
kdgK
2-dehydro-3-deoxygluconokinase; [G] COG0524 Sugar kinases, ribokinase family.
 
   
 0.420
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.