STRINGSTRING
AFY21921.1 AFY21921.1 AFY21919.1 AFY21919.1 tesB tesB AFY21922.1 AFY21922.1 pvdA pvdA pvdD pvdD pta pta rnc rnc AFY21923.1 AFY21923.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21921.1GCN5-related N-acetyltransferase; [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (189 aa)    
Predicted Functional Partners:
AFY21919.1
HAD family hydrolase; [R] COG0546 Predicted phosphatases.
     
 0.649
tesB
[I] COG1946 Acyl-CoA thioesterase.
     
 0.631
AFY21922.1
[BQ] COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
     
 0.621
pvdA
L-ornithine 5-monooxygenase; [Q] COG3486 Lysine/ornithine N-monooxygenase.
  
  
 0.531
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.505
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.477
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.470
AFY21923.1
[R] COG2081 Predicted flavoproteins.
       0.425
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.