STRINGSTRING
AFY21937.1 AFY21937.1 AFY20354.1 AFY20354.1 AFY20353.1 AFY20353.1 AFY20355.1 AFY20355.1 AFY19255.1 AFY19255.1 AFY21192.1 AFY21192.1 AFY19666.1 AFY19666.1 AFY19393.1 AFY19393.1 AFY19116.1 AFY19116.1 AFY20257.1 AFY20257.1 AFY17235.1 AFY17235.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21937.1[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
AFY20354.1
Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.763
AFY20353.1
Hypothetical protein; [S] COG3342 Uncharacterized conserved protein.
 
     0.761
AFY20355.1
FAD dependent oxidoreductase; [P] COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.750
AFY19255.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.709
AFY21192.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.688
AFY19666.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.684
AFY19393.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.668
AFY19116.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.652
AFY20257.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.636
AFY17235.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.625
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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