Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY17609.1 | AFY17611.1 | PputUW4_00401 | PputUW4_00403 | Lipopolysaccharide core biosynthesis protein; [RTKL] COG0515 Serine/threonine protein kinase. | [RTKL] COG0515 Serine/threonine protein kinase. | 0.954 |
| AFY17609.1 | AFY21982.1 | PputUW4_00401 | PputUW4_04792 | Lipopolysaccharide core biosynthesis protein; [RTKL] COG0515 Serine/threonine protein kinase. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.458 |
| AFY17611.1 | AFY17609.1 | PputUW4_00403 | PputUW4_00401 | [RTKL] COG0515 Serine/threonine protein kinase. | Lipopolysaccharide core biosynthesis protein; [RTKL] COG0515 Serine/threonine protein kinase. | 0.954 |
| AFY17611.1 | AFY21982.1 | PputUW4_00403 | PputUW4_04792 | [RTKL] COG0515 Serine/threonine protein kinase. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.402 |
| AFY19618.1 | AFY21982.1 | PputUW4_02420 | PputUW4_04792 | Transcriptional regulator. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.424 |
| AFY21517.1 | AFY21982.1 | PputUW4_04325 | PputUW4_04792 | DNA binding protein MvaT, H-NS family. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.454 |
| AFY21980.1 | AFY21981.1 | PputUW4_04790 | PputUW4_04791 | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | 0.807 |
| AFY21980.1 | AFY21982.1 | PputUW4_04790 | PputUW4_04792 | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.802 |
| AFY21980.1 | AFY21983.1 | PputUW4_04790 | PputUW4_04793 | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | [I] COG2030 Acyl dehydratase. | 0.561 |
| AFY21980.1 | AFY21984.1 | PputUW4_04790 | PputUW4_04794 | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | MORN domain-containing protein; [S] COG4642 Uncharacterized protein conserved in bacteria. | 0.444 |
| AFY21980.1 | AFY21985.1 | PputUW4_04790 | PputUW4_04795 | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | Hypothetical protein; [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.438 |
| AFY21981.1 | AFY21980.1 | PputUW4_04791 | PputUW4_04790 | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | Peptidase S16, lon-like protein; [R] COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. | 0.807 |
| AFY21981.1 | AFY21982.1 | PputUW4_04791 | PputUW4_04792 | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | 0.990 |
| AFY21981.1 | AFY21983.1 | PputUW4_04791 | PputUW4_04793 | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | [I] COG2030 Acyl dehydratase. | 0.539 |
| AFY21981.1 | AFY21984.1 | PputUW4_04791 | PputUW4_04794 | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | MORN domain-containing protein; [S] COG4642 Uncharacterized protein conserved in bacteria. | 0.446 |
| AFY21981.1 | AFY21985.1 | PputUW4_04791 | PputUW4_04795 | LrgB-like protein; [M] COG1346 Putative effector of murein hydrolase. | Hypothetical protein; [MG] COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.432 |
| AFY21982.1 | AFY17609.1 | PputUW4_04792 | PputUW4_00401 | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | Lipopolysaccharide core biosynthesis protein; [RTKL] COG0515 Serine/threonine protein kinase. | 0.458 |
| AFY21982.1 | AFY17611.1 | PputUW4_04792 | PputUW4_00403 | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | [RTKL] COG0515 Serine/threonine protein kinase. | 0.402 |
| AFY21982.1 | AFY19618.1 | PputUW4_04792 | PputUW4_02420 | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | Transcriptional regulator. | 0.424 |
| AFY21982.1 | AFY21517.1 | PputUW4_04792 | PputUW4_04325 | LrgA family protein; [R] COG1380 Putative effector of murein hydrolase LrgA. | DNA binding protein MvaT, H-NS family. | 0.454 |
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