STRINGSTRING
AFY21998.1 AFY21998.1 AFY21383.1 AFY21383.1 AFY21368.1 AFY21368.1 AFY19352.1 AFY19352.1 AFY22485.1 AFY22485.1 AFY18208.1 AFY18208.1 AFY22381.1 AFY22381.1 AFY17574.1 AFY17574.1 AFY17719.1 AFY17719.1 AFY20029.1 AFY20029.1 AFY21460.1 AFY21460.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY21998.1[K] COG2932 Predicted transcriptional regulator. (248 aa)    
Predicted Functional Partners:
AFY21383.1
Hypothetical protein; [K] COG3617 Prophage antirepressor.
 
  
 0.653
AFY21368.1
Leucine-rich repeat-containing protein.
  
     0.646
AFY19352.1
MutT/NUDIX family hydrolase; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.642
AFY22485.1
[K] COG3617 Prophage antirepressor.
 
  
 0.593
AFY18208.1
Hypothetical protein.
  
     0.590
AFY22381.1
S-type Pyocin.
  
  
 0.577
AFY17574.1
Hypothetical protein.
  
     0.576
AFY17719.1
Leucine-rich repeat-containing protein.
  
     0.567
AFY20029.1
[K] COG0583 Transcriptional regulator.
  
     0.556
AFY21460.1
[P] COG3230 Heme oxygenase.
  
     0.550
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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