STRINGSTRING
btuB btuB tonB tonB AFY17379.1 AFY17379.1 tolA tolA tolB tolB AFY22297.1 AFY22297.1 AFY22433.1 AFY22433.1 metH metH AFY20151.1 AFY20151.1 dxs dxs AFY17586.1 AFY17586.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
btuBB12 family TonB-dependent receptor; [H] COG4206 Outer membrane cobalamin receptor protein. (627 aa)    
Predicted Functional Partners:
tonB
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 
 0.747
AFY17379.1
TonB-dependent membrane protein; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 
 0.737
tolA
TolA colicin import membrane protein.
 
 
 
 0.688
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.593
AFY22297.1
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
 
 0.592
AFY22433.1
TonB domain-containing protein.
   
 
 0.592
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.591
AFY20151.1
Hypothetical protein.
    
 
 0.584
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.561
AFY17586.1
ParA family protein; [D] COG1192 ATPases involved in chromosome partitioning.
    
 
 0.520
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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