STRINGSTRING
AFY22092.1 AFY22092.1 anmK anmK znuA znuA amiC amiC AFY20077.1 AFY20077.1 nlpD nlpD tyrS tyrS lepB lepB rlpA2 rlpA2 mrcA mrcA AFY22026.1 AFY22026.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AFY22092.1Peptidase M23B; [M] COG0739 Membrane proteins related to metalloendopeptidases. (501 aa)    
Predicted Functional Partners:
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
    0.884
znuA
Zinc ABC transporter periplasmic protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.714
amiC
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.698
AFY20077.1
[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
 0.665
nlpD
Lipoprotein NlpD; [M] COG0739 Membrane proteins related to metalloendopeptidases.
 
  
0.640
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
       0.629
lepB
[U] COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.596
rlpA2
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.577
mrcA
Penicillin-binding protein 1A; [M] COG5009 Membrane carboxypeptidase/penicillin-binding protein.
 
   
 0.572
AFY22026.1
Hypothetical protein.
  
  
 0.572
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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