STRINGSTRING
AFY22098.1 AFY22098.1 AFY19598.1 AFY19598.1 nasA nasA nasD nasD nasE nasE nasC nasC AFY22097.1 AFY22097.1 pvdD pvdD AFY22096.1 AFY22096.1 pvdI pvdI AFY22099.1 AFY22099.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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[Homology]
Score
AFY22098.1[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase. (322 aa)    
Predicted Functional Partners:
AFY19598.1
[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
  
 
0.923
nasA
[P] COG2223 Nitrate/nitrite transporter.
  
 
 0.911
nasD
Assimilatory nitrite reductase large subunit; [C] COG1251 NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.901
nasE
[PR] COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
  0.900
nasC
Assimilatory nitrate reductase; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
  0.900
AFY22097.1
[S] COG1981 Predicted membrane protein.
       0.711
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.685
AFY22096.1
Hypothetical protein.
       0.661
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.641
AFY22099.1
[S] COG3152 Predicted membrane protein.
  
    0.611
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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