STRINGSTRING
AFY22100.1 AFY22100.1 AFY19468.1 AFY19468.1 AFY18343.1 AFY18343.1 AFY22099.1 AFY22099.1 fabG5 fabG5 AFY22101.1 AFY22101.1 AFY20628.1 AFY20628.1 pvdD pvdD AFY22098.1 AFY22098.1 AFY22097.1 AFY22097.1 coq7 coq7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22100.1Short-chain dehydrogenase/reductase SDR; [R] COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (262 aa)    
Predicted Functional Partners:
AFY19468.1
Short-chain dehydrogenase/reductase SDR; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 
 0.712
AFY18343.1
3-oxoacyl-(acyl-carrier-protein) reductase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 
 0.659
AFY22099.1
[S] COG3152 Predicted membrane protein.
       0.649
fabG5
3-ketoacyl-(acyl-carrier-protein) reductase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 
 0.627
AFY22101.1
Histidine triad (HIT) protein; [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
       0.620
AFY20628.1
Oxidoreductase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 
 0.580
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.579
AFY22098.1
[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
     
 0.508
AFY22097.1
[S] COG1981 Predicted membrane protein.
       0.465
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
       0.434
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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