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pqqF pqqF AFY22153.1 AFY22153.1 iaaM iaaM pqqB2 pqqB2 pqqE2 pqqE2 pqqC2 pqqC2 pqqH pqqH AFY18000.1 AFY18000.1 AFY18487.1 AFY18487.1 AFY20607.1 AFY20607.1 ribD ribD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
pqqFCoenzyme PQQ biosynthesis protein PqqF; [O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; Belongs to the peptidase M16 family. (809 aa)    
Predicted Functional Partners:
AFY22153.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; [R] COG0388 Predicted amidohydrolase.
   
 
 0.680
iaaM
Tryptophan 2-monooxygenase; [E] COG1231 Monoamine oxidase.
       0.655
pqqB2
Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
     
 0.628
pqqE2
Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
     
 0.567
pqqC2
Pyrroloquinoline quinone biosynthesis proteinPqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
     
 0.555
pqqH
Peptidase S9 prolyl oligopeptidase; [E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
  
  
 0.502
AFY18000.1
Peptidase S1 and S6, chymotrypsin/Hap; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.495
AFY18487.1
Protease Do; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
   
 
 0.495
AFY20607.1
Hypothetical protein.
   
 
 0.494
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 
 0.487
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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