STRINGSTRING
AFY22186.1 AFY22186.1 fecR5 fecR5 AFY22187.1 AFY22187.1 fecI5 fecI5 fecR4 fecR4 fecR3 fecR3 fecR1 fecR1 AFY18044.1 AFY18044.1 fecR2 fecR2 AFY20092.1 AFY20092.1 tonB tonB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY22186.1TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (811 aa)    
Predicted Functional Partners:
fecR5
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.867
AFY22187.1
[S] COG3182 Uncharacterized iron-regulated membrane protein.
 
  
 0.828
fecI5
[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.760
fecR4
Sigma factor regulatory protein FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.739
fecR3
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.731
fecR1
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.724
AFY18044.1
FecR family protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.717
fecR2
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.714
AFY20092.1
Sigma factor regulatory protein FecR/PupR family; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.709
tonB
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.699
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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