STRINGSTRING
AFY22187.1 AFY22187.1 AFY22186.1 AFY22186.1 AFY22188.1 AFY22188.1 AFY20625.1 AFY20625.1 AFY18830.1 AFY18830.1 fecR5 fecR5 AFY17446.1 AFY17446.1 AFY22189.1 AFY22189.1 AFY17933.1 AFY17933.1 fecI5 fecI5 fpvA fpvA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AFY22187.1[S] COG3182 Uncharacterized iron-regulated membrane protein. (376 aa)    
Predicted Functional Partners:
AFY22186.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.828
AFY22188.1
Hypothetical protein.
  
    0.814
AFY20625.1
Ferric siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.803
AFY18830.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.764
fecR5
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
   
 0.620
AFY17446.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.612
AFY22189.1
[O] COG0625 Glutathione S-transferase.
 
     0.573
AFY17933.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.572
fecI5
[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.569
fpvA
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.538
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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