STRINGSTRING
AFY22248.1 AFY22248.1 AFY22247.1 AFY22247.1 AFY22249.1 AFY22249.1 fba fba AFY18344.1 AFY18344.1 rlmF rlmF AFY18198.1 AFY18198.1 ppnP ppnP AFY22501.1 AFY22501.1 AFY17785.1 AFY17785.1 AFY17337.1 AFY17337.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22248.1Hypothetical protein; [R] COG1451 Predicted metal-dependent hydrolase. (171 aa)    
Predicted Functional Partners:
AFY22247.1
[S] COG4519 Uncharacterized protein conserved in bacteria.
       0.802
AFY22249.1
Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain.
       0.699
fba
Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
      0.644
AFY18344.1
Hypothetical protein.
 
    0.621
rlmF
Ribosomal RNA large subunit methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
 
     0.531
AFY18198.1
Hypothetical protein; [S] COG4628 Uncharacterized conserved protein.
 
     0.516
ppnP
Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.498
AFY22501.1
Hypothetical protein; [R] COG0727 Predicted Fe-S-cluster oxidoreductase.
 
     0.481
AFY17785.1
Protein kinase; [T] COG1718 Serine/threonine protein kinase involved in cell cycle control.
  
     0.461
AFY17337.1
Hypothetical protein.
 
     0.422
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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