STRINGSTRING
AFY22257.1 AFY22257.1 metK metK AFY21751.1 AFY21751.1 AFY22480.1 AFY22480.1 AFY20711.1 AFY20711.1 AFY17257.1 AFY17257.1 AFY18037.1 AFY18037.1 cueA cueA AFY21818.1 AFY21818.1 chpC chpC pvdD pvdD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22257.1ArsR family transcriptional regulator; [QR] COG0500 SAM-dependent methyltransferases. (331 aa)    
Predicted Functional Partners:
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.833
AFY21751.1
Hypothetical protein.
  
     0.737
AFY22480.1
Hypothetical protein.
  
     0.720
AFY20711.1
Hypothetical protein.
  
     0.717
AFY17257.1
Hypothetical protein.
  
     0.716
AFY18037.1
YebG family protein; [S] COG3141 Uncharacterized protein conserved in bacteria.
  
     0.670
cueA
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
  
 0.620
AFY21818.1
Hypothetical protein.
  
     0.610
chpC
Chemosensory protein ChpC.
  
   
 0.592
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.571
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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