STRINGSTRING
AFY22280.1 AFY22280.1 mdcG mdcG mdcE mdcE mdcC mdcC mdcA mdcA mdcD mdcD mdcB mdcB sftR sftR madL madL AFY19195.1 AFY19195.1 AFY22279.1 AFY22279.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY22280.1[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
mdcG
phosphoribosyl-dephospho-CoA transferase; Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein]; Belongs to the MdcG family.
  
     0.741
mdcE
Malonate decarboxylase, gamma subunit.
  
    0.737
mdcC
Malonate decarboxylase subunit delta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
  
     0.731
mdcA
Malonate decarboxylase, alpha subunit.
  
     0.706
mdcD
[I] COG0777 Acetyl-CoA carboxylase beta subunit.
  
    0.682
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
  
     0.672
sftR
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.654
madL
Malonate transporter MadL subunit.
  
     0.635
AFY19195.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.620
AFY22279.1
Hemolysin III; [R] COG1272 Predicted membrane protein, hemolysin III homolog.
 
    0.609
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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