STRINGSTRING
AFY22332.1 AFY22332.1 AFY22334.1 AFY22334.1 AFY22333.1 AFY22333.1 AFY22335.1 AFY22335.1 AFY22331.1 AFY22331.1 AFY17536.1 AFY17536.1 phaF1 phaF1 AFY21282.1 AFY21282.1 AFY18534.1 AFY18534.1 AFY20771.1 AFY20771.1 AFY20790.1 AFY20790.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22332.1[K] COG1309 Transcriptional regulator. (223 aa)    
Predicted Functional Partners:
AFY22334.1
Hypothetical protein.
 
   
 0.817
AFY22333.1
[C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
  
 0.786
AFY22335.1
Glucose-methanol-choline oxidoreductase; [E] COG2303 Choline dehydrogenase and related flavoproteins.
 
  
 0.767
AFY22331.1
[P] COG2897 Rhodanese-related sulfurtransferase.
       0.689
AFY17536.1
Poly(hydroxyalkanoate) granule-associated protein.
  
     0.617
phaF1
Polyhydroxyalkanoate granule-associated protein.
  
     0.613
AFY21282.1
[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.568
AFY18534.1
Hypothetical protein.
  
     0.497
AFY20771.1
Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
   0.453
AFY20790.1
[K] COG1802 Transcriptional regulators.
  
   
 0.449
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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