STRINGSTRING
AFY22333.1 AFY22333.1 AFY22335.1 AFY22335.1 AFY22334.1 AFY22334.1 AFY22332.1 AFY22332.1 pvdD pvdD AFY22331.1 AFY22331.1 phaD1 phaD1 AFY20947.1 AFY20947.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY22333.1[C] COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (476 aa)    
Predicted Functional Partners:
AFY22335.1
Glucose-methanol-choline oxidoreductase; [E] COG2303 Choline dehydrogenase and related flavoproteins.
 
  
 0.789
AFY22334.1
Hypothetical protein.
 
     0.787
AFY22332.1
[K] COG1309 Transcriptional regulator.
 
  
 0.786
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.533
AFY22331.1
[P] COG2897 Rhodanese-related sulfurtransferase.
   
 
 0.492
phaD1
[K] COG1309 Transcriptional regulator.
 
  
 0.474
AFY20947.1
Sensory box histidine kinase/response regulator; [ER] COG0591 Na+/proline symporter.
  
 
 0.430
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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