STRINGSTRING
AFY22381.1 AFY22381.1 imm imm AFY17645.1 AFY17645.1 AFY21794.1 AFY21794.1 AFY21796.1 AFY21796.1 AFY19738.1 AFY19738.1 AFY17719.1 AFY17719.1 AFY18451.1 AFY18451.1 AFY21941.1 AFY21941.1 AFY21795.1 AFY21795.1 AFY19685.1 AFY19685.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22381.1S-type Pyocin. (840 aa)    
Predicted Functional Partners:
imm
Colicin/pyocin immunity family protein.
       0.779
AFY17645.1
Hypothetical protein.
  
     0.752
AFY21794.1
Hypothetical protein.
  
     0.750
AFY21796.1
Hypothetical protein.
 
     0.748
AFY19738.1
UvrD/REP helicase; [L] COG0210 Superfamily I DNA and RNA helicases.
  
     0.746
AFY17719.1
Leucine-rich repeat-containing protein.
  
     0.728
AFY18451.1
Hypothetical protein.
  
     0.724
AFY21941.1
Hypothetical protein.
  
     0.724
AFY21795.1
Hypothetical protein.
  
     0.719
AFY19685.1
Hypothetical protein.
  
     0.681
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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