STRINGSTRING
AFY22416.1 AFY22416.1 AFY22415.1 AFY22415.1 AFY22414.1 AFY22414.1 AFY22413.1 AFY22413.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22416.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
AFY22415.1
[O] COG1585 Membrane protein implicated in regulation of membrane protease activity.
       0.609
AFY22414.1
SPFH domain/band 7 family protein; [O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
       0.591
AFY22413.1
[NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.463
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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