STRINGSTRING
AFY22444.1 AFY22444.1 AFY22442.1 AFY22442.1 AFY22443.1 AFY22443.1 AFY22441.1 AFY22441.1 AFY17399.1 AFY17399.1 AFY20195.1 AFY20195.1 AFY19860.1 AFY19860.1 AFY18228.1 AFY18228.1 AFY18229.1 AFY18229.1 AFY20368.1 AFY20368.1 AFY21648.1 AFY21648.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY22444.1ABC transporter ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component. (245 aa)    
Predicted Functional Partners:
AFY22442.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 0.997
AFY22443.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 0.997
AFY22441.1
ABC transporter periplasmic protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.935
AFY17399.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.880
AFY20195.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.873
AFY19860.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.866
AFY18228.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 0.860
AFY18229.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.825
AFY20368.1
Amino acid ABC transporter permease; [E] COG4160 ABC-type arginine/histidine transport system, permease component.
  
 0.740
AFY21648.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.736
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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