STRINGSTRING
AFY22498.1 AFY22498.1 dadA1 dadA1 alr alr AFY19566.1 AFY19566.1 AFY22526.1 AFY22526.1 lrp lrp AFY20219.1 AFY20219.1 fusA2 fusA2 AFY22496.1 AFY22496.1 nnrD nnrD AFY20225.1 AFY20225.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY22498.1Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family. (117 aa)    
Predicted Functional Partners:
dadA1
D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids.
 
  
 0.885
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.726
AFY19566.1
Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
 
   
 0.704
AFY22526.1
Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
 
   
 0.645
lrp
Leucine-responsive regulatory protein; [K] COG1522 Transcriptional regulators.
       0.592
AFY20219.1
Endoribonuclease L-PSP family protein; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
 
   
 0.581
fusA2
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
 0.483
AFY22496.1
[K] COG1476 Predicted transcriptional regulators.
  
    0.462
nnrD
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
  
  
 0.432
AFY20225.1
D-amino-acid dehydrogenase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 0.402
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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