Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17773.1 | AFY18097.1 | PputUW4_00565 | PputUW4_00890 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AFY17773.1 | AFY21513.1 | PputUW4_00565 | PputUW4_04321 | Hypothetical protein. | Hypothetical protein; [R] COG3233 Predicted deacetylase. | 0.708 |
AFY17773.1 | AFY22581.1 | PputUW4_00565 | PputUW4_05392 | Hypothetical protein. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.408 |
AFY17978.1 | AFY22581.1 | PputUW4_00771 | PputUW4_05392 | [S] COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.586 |
AFY18097.1 | AFY17773.1 | PputUW4_00890 | PputUW4_00565 | Hypothetical protein. | Hypothetical protein. | 0.484 |
AFY18097.1 | AFY22581.1 | PputUW4_00890 | PputUW4_05392 | Hypothetical protein. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.421 |
AFY21119.1 | AFY22581.1 | PputUW4_03927 | PputUW4_05392 | Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.615 |
AFY21513.1 | AFY17773.1 | PputUW4_04321 | PputUW4_00565 | Hypothetical protein; [R] COG3233 Predicted deacetylase. | Hypothetical protein. | 0.708 |
AFY21513.1 | AFY22581.1 | PputUW4_04321 | PputUW4_05392 | Hypothetical protein; [R] COG3233 Predicted deacetylase. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.479 |
AFY22580.1 | AFY22581.1 | PputUW4_05391 | PputUW4_05392 | [S] COG2510 Predicted membrane protein. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.513 |
AFY22580.1 | mutB | PputUW4_05391 | PputUW4_05390 | [S] COG2510 Predicted membrane protein. | DNA-dependent helicase II; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.556 |
AFY22581.1 | AFY17773.1 | PputUW4_05392 | PputUW4_00565 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.408 |
AFY22581.1 | AFY17978.1 | PputUW4_05392 | PputUW4_00771 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | [S] COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family. | 0.586 |
AFY22581.1 | AFY18097.1 | PputUW4_05392 | PputUW4_00890 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.421 |
AFY22581.1 | AFY21119.1 | PputUW4_05392 | PputUW4_03927 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.615 |
AFY22581.1 | AFY21513.1 | PputUW4_05392 | PputUW4_04321 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [R] COG3233 Predicted deacetylase. | 0.479 |
AFY22581.1 | AFY22580.1 | PputUW4_05392 | PputUW4_05391 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | [S] COG2510 Predicted membrane protein. | 0.513 |
AFY22581.1 | AFY22582.1 | PputUW4_05392 | PputUW4_05393 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.562 |
AFY22581.1 | htpX | PputUW4_05392 | PputUW4_01440 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | Heat shock protein HtpX; [O] COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family. | 0.400 |
AFY22581.1 | mutB | PputUW4_05392 | PputUW4_05390 | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | DNA-dependent helicase II; [L] COG0210 Superfamily I DNA and RNA helicases. | 0.412 |
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