STRINGSTRING
ACA70614.1 ACA70614.1 ACA71389.1 ACA71389.1 ACA70609.1 ACA70609.1 ACA70613.1 ACA70613.1 ACA71391.1 ACA71391.1 ACA71772.1 ACA71772.1 ACA72253.1 ACA72253.1 ACA74241.1 ACA74241.1 ACA71584.1 ACA71584.1 ACA71456.1 ACA71456.1 ACA71388.1 ACA71388.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA70614.1PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0044 hypothetical protein. (76 aa)    
Predicted Functional Partners:
ACA71389.1
SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: pen:PSEEN4540 alginate-C5-mannuronan-epimerase AlgG.
  
     0.648
ACA70609.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN0040 hypothetical protein.
  
    0.622
ACA70613.1
PFAM: OsmC family protein; KEGG: pap:PSPA7_0059 osmotically inducible protein OsmC.
       0.581
ACA71391.1
PFAM: Sel1 domain protein repeat-containing protein; KEGG: pen:PSEEN4538 alginate biosynthesis precursor AlgK.
  
     0.574
ACA71772.1
KEGG: pen:PSEEN1429 hypothetical protein.
  
     0.556
ACA72253.1
PFAM: CHAD domain containing protein; KEGG: pen:PSEEN1875 hypothetical protein.
  
     0.553
ACA74241.1
PFAM: Arc domain protein DNA binding domain protein; KEGG: pen:PSEEN3868 alginate biosynthesis transcriptional activator.
  
     0.521
ACA71584.1
KEGG: psp:PSPPH_3942 lipoprotein, putative.
  
     0.520
ACA71456.1
KEGG: pen:PSEEN4478 hypothetical protein.
  
     0.512
ACA71388.1
KEGG: pen:PSEEN4541 alginate biosynthesis protein AlgX.
  
     0.507
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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