STRINGSTRING
ACA71013.1 ACA71013.1 ACA71014.1 ACA71014.1 ACA71011.1 ACA71011.1 ACA71012.1 ACA71012.1 ACA74499.1 ACA74499.1 ACA71589.1 ACA71589.1 rlmF rlmF ppnP ppnP ACA71015.1 ACA71015.1 ACA73528.1 ACA73528.1 ACA70776.1 ACA70776.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA71013.1PFAM: protein of unknown function DUF45; KEGG: pen:PSEEN5016 hypothetical protein. (166 aa)    
Predicted Functional Partners:
ACA71014.1
KEGG: pen:PSEEN5015 hypothetical protein.
       0.785
ACA71011.1
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
      0.775
ACA71012.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: pen:PSEEN5017 sensory box protein/response regulator (hybrid); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
       0.712
ACA74499.1
PFAM: protein of unknown function DUF1456; KEGG: pen:PSEEN4117 hypothetical protein.
 
    0.589
ACA71589.1
KEGG: pen:PSEEN1174 hypothetical protein.
 
     0.518
rlmF
Protein of unknown function DUF890; Specifically methylates the adenine in position 1618 of 23S rRNA.
 
     0.498
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.488
ACA71015.1
SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN5011 amino acid ABC transporter, periplasmic amino acid-binding protein.
       0.462
ACA73528.1
PFAM: protein of unknown function RIO1; KEGG: pfl:PFL_0708 hypothetical protein.
  
     0.432
ACA70776.1
KEGG: pen:PSEEN0169 hypothetical protein.
 
     0.430
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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