STRINGSTRING
ACA71532.1 ACA71532.1 ACA71531.1 ACA71531.1 ACA71530.1 ACA71530.1 ACA71529.1 ACA71529.1 ACA74029.1 ACA74029.1 lexA-2 lexA-2 lexA lexA ACA71466.1 ACA71466.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA71532.1PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: pen:PSEEN4359 transcriptional regulator TtgR for multidrug efflux pump (TetR/AcrR family). (210 aa)    
Predicted Functional Partners:
ACA71531.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4360 multidrug/solvent efflux RND membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.873
ACA71530.1
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pen:PSEEN4361 multidrug/solvent RND transporter TtgB.
     
 0.715
ACA71529.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pen:PSEEN4362 multidrug/solvent efflux outer membrane protein TtgC, RND family.
     
 0.711
ACA74029.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Taurine catabolism dioxygenase TauD/TfdA; phosphopantetheine-binding; KEGG: pfo:Pfl_1846 peptide synthase.
     
 0.556
lexA-2
Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
     
 0.455
lexA
Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
     
 0.417
ACA71466.1
PFAM: major facilitator superfamily MFS_1; KEGG: pen:PSEEN4467 multidrug efflux MFS transporter.
      
 0.416
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.