STRINGSTRING
ACA71627.1 ACA71627.1 rnfG rnfG rnfD rnfD ACA71630.1 ACA71630.1 nth nth ACA73425.1 ACA73425.1 ACA72407.1 ACA72407.1 ACA73460.1 ACA73460.1 ACA74860.1 ACA74860.1 ACA70514.1 ACA70514.1 ACA70992.1 ACA70992.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA71627.1KEGG: pen:PSEEN1215 hypothetical protein; Belongs to the NqrDE/RnfAE family. (174 aa)    
Predicted Functional Partners:
rnfG
Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
  
 
 0.985
rnfD
Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
  
 
 0.984
ACA71630.1
KEGG: pen:PSEEN1219 electron transport complex protein RnfA; Belongs to the NqrDE/RnfAE family.
 
 
 0.976
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
  
  
 0.933
ACA73425.1
KEGG: pen:PSEEN2965 hypothetical protein.
  
     0.767
ACA72407.1
SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pen:PSEEN3358 hypothetical protein.
  
     0.765
ACA73460.1
PFAM: leucine-rich repeat protein; KEGG: pen:PSEEN3009 hypothetical protein.
  
     0.765
ACA74860.1
KEGG: par:Psyc_1601 hypothetical protein.
  
     0.759
ACA70514.1
KEGG: pst:PSPTO_0030 hypothetical protein.
  
     0.756
ACA70992.1
KEGG: pae:PA0429 hypothetical protein.
  
     0.751
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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