STRINGSTRING
ACA71650.1 ACA71650.1 dinG dinG ACA71476.1 ACA71476.1 ACA71652.1 ACA71652.1 ACA74858.1 ACA74858.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA71650.1KEGG: pen:PSEEN1272 hypothetical protein. (154 aa)    
Predicted Functional Partners:
dinG
Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase.
       0.614
ACA71476.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN4456 hypothetical protein.
  
     0.425
ACA71652.1
Beta-agarase; KEGG: pen:PSEEN1274 hydrolase.
       0.420
ACA74858.1
PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pen:PSEEN0952 flavohemoprotein; Belongs to the globin family.
 
   
 0.411
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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