STRINGSTRING
ACA72602.1 ACA72602.1 ACA71456.1 ACA71456.1 ACA75073.1 ACA75073.1 ACA74576.1 ACA74576.1 ACA71513.1 ACA71513.1 ACA71514.1 ACA71514.1 ACA71573.1 ACA71573.1 ACA71016.1 ACA71016.1 ACA74553.1 ACA74553.1 ACA71032.1 ACA71032.1 ACA74288.1 ACA74288.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA72602.1KEGG: pen:PSEEN3211 transcriptional regulator MvaT, P16 subunit. (119 aa)    
Predicted Functional Partners:
ACA71456.1
KEGG: pen:PSEEN4478 hypothetical protein.
  
     0.739
ACA75073.1
KEGG: pen:PSEEN4843 hypothetical protein.
  
     0.718
ACA74576.1
KEGG: pen:PSEEN4234 hypothetical protein.
  
     0.693
ACA71513.1
PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4434 hypothetical protein.
  
     0.683
ACA71514.1
KEGG: pau:PA14_56040 putative deacetylase.
  
     0.682
ACA71573.1
PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: pen:PSEEN4295 sigma factor AlgU negative regulatory protein MucA.
  
     0.619
ACA71016.1
TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: pen:PSEEN5010 hypothetical protein.
  
     0.607
ACA74553.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: pen:PSEEN4211 outer membrane protein OmpH-like.
  
     0.603
ACA71032.1
PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein.
  
     0.577
ACA74288.1
TIGRFAM: yecA family protein; KEGG: pen:PSEEN3923 hypothetical protein; Belongs to the UPF0149 family.
  
     0.571
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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