STRINGSTRING
ACA72619.1 ACA72619.1 ACA72620.1 ACA72620.1 ACA74356.1 ACA74356.1 pxpA pxpA ureB ureB ureC ureC ureA ureA pxpA-2 pxpA-2 ACA74357.1 ACA74357.1 ACA72617.1 ACA72617.1 ACA71321.1 ACA71321.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACA72619.1PFAM: Allophanate hydrolase subunit 1; KEGG: psb:Psyr_2721 protein of unknown function DUF213. (295 aa)    
Predicted Functional Partners:
ACA72620.1
KEGG: pfl:PFL_4547 UreA amidolyase-related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2.
 0.997
ACA74356.1
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: pen:PSEEN4016 allophanate hydrolase subunit 2.
 
 
 0.967
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.953
ureB
KEGG: pen:PSEEN2095 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; Belongs to the urease beta subunit family.
     
 0.907
ureC
TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; KEGG: pen:PSEEN2096 urease alpha subunit; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
     
 0.907
ureA
KEGG: pen:PSEEN2094 urease gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; Belongs to the urease gamma subunit family.
     
 0.901
pxpA-2
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.893
ACA74357.1
PFAM: Allophanate hydrolase subunit 1; KEGG: pen:PSEEN4017 allophanate hydrolase subunit 1.
  
     0.734
ACA72617.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_2444 transcriptional regulator, LysR family.
 
     0.715
ACA71321.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pen:PSEEN4613 transcriptional regulator, IclR family.
  
    0.454
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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