STRINGSTRING
ACA72738.1 ACA72738.1 ACA70734.1 ACA70734.1 ACA73755.1 ACA73755.1 ACA73215.1 ACA73215.1 ACA75359.1 ACA75359.1 ACA74282.1 ACA74282.1 ACA75358.1 ACA75358.1 ACA75357.1 ACA75357.1 ACA75360.1 ACA75360.1 ACA72739.1 ACA72739.1 ACA72377.1 ACA72377.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACA72738.1Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pmy:Pmen_0490 transcriptional regulator, AraC family. (330 aa)    
Predicted Functional Partners:
ACA70734.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_1960 transcriptional regulator, AraC family.
  
   0.688
ACA73755.1
Hypothetical protein; KEGG: bpl:BURPS1106A_A1931 transcriptional regulator, AraC family.
  
     0.675
ACA73215.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pen:PSEEN3163 transcriptional regulator, AraC family.
  
   0.672
ACA75359.1
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: pen:PSEEN5160 sarcosine oxidase, delta subunit.
 
    0.637
ACA74282.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3917 transcriptional regulator, AraC family.
  
   0.635
ACA75358.1
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5159 sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
 
     0.633
ACA75357.1
TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit; KEGG: pen:PSEEN5158 sarcosine oxidase, gamma subunit.
 
    0.620
ACA75360.1
TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN5161 sarcosine oxidase beta subunit.
  
    0.589
ACA72739.1
PFAM: phospholipase D/Transphosphatidylase; KEGG: pst:PSPTO_3463 phosphatidylserine synthase.
       0.523
ACA72377.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pen:PSEEN3442 transcriptional regulator, AraC family.
  
   0.481
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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