STRINGSTRING
ACA75317.1 ACA75317.1 ACA72842.1 ACA72842.1 ACA70594.1 ACA70594.1 ACA72013.1 ACA72013.1 ACA70741.1 ACA70741.1 ACA75318.1 ACA75318.1 ACA71437.1 ACA71437.1 aroA aroA ACA73783.1 ACA73783.1 ACA70692.1 ACA70692.1 bioC bioC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA75317.1KEGG: pen:PSEEN5122 competence protein ComF. (245 aa)    
Predicted Functional Partners:
ACA72842.1
Diguanylate cyclase/phosphodiesterase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: eba:ebA163 sensory box/GGDEF family protein.
  
  
 0.932
ACA70594.1
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pen:PSEEN0026 smf protein, DNA processing chain A.
 
 
 0.922
ACA72013.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: psb:Psyr_1632 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.903
ACA70741.1
Mg chelatase, subunit ChlI; KEGG: pen:PSEEN5385 magnesium chelatase subunit D; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.848
ACA75318.1
Transcriptional regulator, ModE family; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: pen:PSEEN5123 molybdate transport regulator ModE.
       0.748
ACA71437.1
PFAM: protein of unknown function UPF0102; KEGG: pen:PSEEN4497 hypothetical protein; Belongs to the UPF0102 family.
 
    0.738
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
   
  
 0.689
ACA73783.1
PFAM: DNA repair protein RadC; KEGG: pfo:Pfl_3005 DNA repair protein RadC.
 
    0.673
ACA70692.1
PFAM: DNA repair protein RadC; KEGG: pen:PSEEN5431 DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.666
bioC
Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
  
 0.650
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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