STRINGSTRING
Xcel_3115 Xcel_3115 Xcel_3113 Xcel_3113 Xcel_3114 Xcel_3114 Xcel_3112 Xcel_3112 Xcel_3111 Xcel_3111 Xcel_1893 Xcel_1893 Xcel_2610 Xcel_2610 Xcel_2550 Xcel_2550 Xcel_3116 Xcel_3116 Xcel_1892 Xcel_1892 Xcel_2107 Xcel_2107
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Xcel_3115PFAM: MaoC domain protein dehydratase; KEGG: ppf:Pput_0619 dehydratase. (333 aa)    
Predicted Functional Partners:
Xcel_3113
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: pap:PSPA7_5507 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.963
Xcel_3114
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc0536 3-ketoacyl-(acyl-carrier-protein) reductase.
 
 0.957
Xcel_3112
PFAM: regulatory protein TetR; KEGG: pau:PA14_35210 TetR family transcriptional regulator.
 
     0.905
Xcel_3111
PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_6432 putative acyl-CoA dehydrogenase.
 
 0.801
Xcel_1893
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.704
Xcel_2610
Hypothetical protein.
  
     0.463
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
 
  
 0.448
Xcel_3116
Hypothetical protein.
       0.443
Xcel_1892
KEGG: sfu:Sfum_1403 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.430
Xcel_2107
KEGG: cvi:CV_2790 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.430
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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