STRINGSTRING
AEF20038.1 AEF20038.1 AEF24304.1 AEF24304.1 AEF21039.1 AEF21039.1 AEF24192.1 AEF24192.1 AEF24370.1 AEF24370.1 aroE aroE AEF21291.1 AEF21291.1 hemF hemF AEF24375.1 AEF24375.1 AEF23462.1 AEF23462.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AEF20038.1KEGG: pap:PSPA7_4140 putative L-malate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (346 aa)    
Predicted Functional Partners:
AEF24304.1
PFAM: Bile acid:sodium symporter; KEGG: pfl:PFL_3827 bile acid/Na+ symporter family protein.
  
    0.834
AEF21039.1
Membrane dipeptidase; KEGG: pmy:Pmen_3564 peptidase M19, renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase.
  
    0.808
AEF24192.1
Membrane dipeptidase; KEGG: pfo:Pfl01_5225 peptidase M19, renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase.
  
    0.808
AEF24370.1
4-hydroxyproline epimerase; KEGG: pag:PLES_40441 putative proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
   
 0.572
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
    0.549
AEF21291.1
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.517
hemF
Coproporphyrinogen-III oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.428
AEF24375.1
KEGG: pag:PLES_40581 putative dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; Belongs to the DapA family.
 
   
 0.417
AEF23462.1
L-rhamnonate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; KEGG: pfl:PFL_1526 mandelate racemase/muconate lactonizing enzyme family protein; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
 
     0.406
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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