Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF20049.1 | AEF20050.1 | Psefu_0062 | Psefu_0063 | TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pmy:Pmen_4560 TRAP transporter solute receptor TAXI family protein. | KEGG: psa:PST_4125 transporter, putative; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | 0.937 |
AEF20049.1 | AEF20051.1 | Psefu_0062 | Psefu_0064 | TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pmy:Pmen_4560 TRAP transporter solute receptor TAXI family protein. | PFAM: Protein of unknown function DUF1850; KEGG: pmy:Pmen_4558 hypothetical protein. | 0.897 |
AEF20050.1 | AEF20049.1 | Psefu_0063 | Psefu_0062 | KEGG: psa:PST_4125 transporter, putative; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pmy:Pmen_4560 TRAP transporter solute receptor TAXI family protein. | 0.937 |
AEF20050.1 | AEF20051.1 | Psefu_0063 | Psefu_0064 | KEGG: psa:PST_4125 transporter, putative; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | PFAM: Protein of unknown function DUF1850; KEGG: pmy:Pmen_4558 hypothetical protein. | 0.954 |
AEF20051.1 | AEF20049.1 | Psefu_0064 | Psefu_0062 | PFAM: Protein of unknown function DUF1850; KEGG: pmy:Pmen_4558 hypothetical protein. | TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pmy:Pmen_4560 TRAP transporter solute receptor TAXI family protein. | 0.897 |
AEF20051.1 | AEF20050.1 | Psefu_0064 | Psefu_0063 | PFAM: Protein of unknown function DUF1850; KEGG: pmy:Pmen_4558 hypothetical protein. | KEGG: psa:PST_4125 transporter, putative; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. | 0.954 |