node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF20089.1 | AEF20090.1 | Psefu_0102 | Psefu_0103 | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. | 0.985 |
AEF20089.1 | AEF20656.1 | Psefu_0102 | Psefu_0678 | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_3864 ABC transporter related; SMART: ATPase, AAA+ type, core. | 0.554 |
AEF20089.1 | dksA | Psefu_0102 | Psefu_0101 | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.942 |
AEF20089.1 | folE2 | Psefu_0102 | Psefu_0100 | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.916 |
AEF20090.1 | AEF20089.1 | Psefu_0103 | Psefu_0102 | PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | 0.985 |
AEF20090.1 | dksA | Psefu_0103 | Psefu_0101 | PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.873 |
AEF20090.1 | folE2 | Psefu_0103 | Psefu_0100 | PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.715 |
AEF20656.1 | AEF20089.1 | Psefu_0678 | Psefu_0102 | Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_3864 ABC transporter related; SMART: ATPase, AAA+ type, core. | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | 0.554 |
AEF20656.1 | dksA | Psefu_0678 | Psefu_0101 | Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_3864 ABC transporter related; SMART: ATPase, AAA+ type, core. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.582 |
dksA | AEF20089.1 | Psefu_0101 | Psefu_0102 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | 0.942 |
dksA | AEF20090.1 | Psefu_0101 | Psefu_0103 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. | 0.873 |
dksA | AEF20656.1 | Psefu_0101 | Psefu_0678 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmy:Pmen_3864 ABC transporter related; SMART: ATPase, AAA+ type, core. | 0.582 |
dksA | folE2 | Psefu_0101 | Psefu_0100 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.830 |
dksA | hfq | Psefu_0101 | Psefu_4106 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.824 |
dksA | rpoA | Psefu_0101 | Psefu_0665 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.587 |
dksA | rpoB | Psefu_0101 | Psefu_0633 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.625 |
dksA | rpoC | Psefu_0101 | Psefu_0634 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.749 |
dksA | rpoD | Psefu_0101 | Psefu_3960 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.658 |
dksA | rpoZ | Psefu_0101 | Psefu_0291 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.840 |
folE2 | AEF20089.1 | Psefu_0100 | Psefu_0102 | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal. | 0.916 |