STRINGSTRING
AEF20090.1 AEF20090.1 AEF20089.1 AEF20089.1 dksA dksA folE2 folE2 AEF20093.1 AEF20093.1 AEF22189.1 AEF22189.1 AEF23917.1 AEF23917.1 AEF20850.1 AEF20850.1 AEF22575.1 AEF22575.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF20090.1PFAM: Protein of unknown function DUF1826; KEGG: pmy:Pmen_4535 hypothetical protein. (214 aa)    
Predicted Functional Partners:
AEF20089.1
KEGG: pfs:PFLU6085 putative cobalamine biosynthesis-like protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal.
 
  
 0.985
dksA
Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.
  
    0.873
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
    0.715
AEF20093.1
PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: pmy:Pmen_4533 cobalamin synthesis protein, P47K.
 
  
 0.708
AEF22189.1
KEGG: avn:Avin_29230 hypothetical protein.
  
    0.600
AEF23917.1
KEGG: pap:PSPA7_5244 hypothetical protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal.
 
  
 0.481
AEF20850.1
KEGG: pmy:Pmen_0980 hypothetical protein.
  
     0.411
AEF22575.1
Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pfs:PFLU5369 hypothetical protein.
   
    0.402
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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