Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF20160.1 | AEF20161.1 | Psefu_0174 | Psefu_0175 | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | 0.811 |
| AEF20160.1 | AEF20165.1 | Psefu_0174 | Psefu_0179 | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.525 |
| AEF20160.1 | ftsE | Psefu_0174 | Psefu_0178 | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.545 |
| AEF20160.1 | ftsY | Psefu_0174 | Psefu_0177 | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.789 |
| AEF20160.1 | rpoH | Psefu_0174 | Psefu_0180 | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.406 |
| AEF20161.1 | AEF20160.1 | Psefu_0175 | Psefu_0174 | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | 0.811 |
| AEF20161.1 | AEF20165.1 | Psefu_0175 | Psefu_0179 | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.525 |
| AEF20161.1 | ftsE | Psefu_0175 | Psefu_0178 | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.567 |
| AEF20161.1 | ftsY | Psefu_0175 | Psefu_0177 | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.542 |
| AEF20161.1 | rpoH | Psefu_0175 | Psefu_0180 | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.419 |
| AEF20165.1 | AEF20160.1 | Psefu_0179 | Psefu_0174 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | 0.525 |
| AEF20165.1 | AEF20161.1 | Psefu_0179 | Psefu_0175 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: pae:PA0371 hypothetical protein. | 0.525 |
| AEF20165.1 | ftsE | Psefu_0179 | Psefu_0178 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.997 |
| AEF20165.1 | ftsY | Psefu_0179 | Psefu_0177 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.868 |
| AEF20165.1 | ftsZ | Psefu_0179 | Psefu_3560 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.406 |
| AEF20165.1 | mraZ | Psefu_0179 | Psefu_3574 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | PFAM: MraZ domain; manually curated; TIGRFAM: MraZ; KEGG: pmy:Pmen_0913 cell division protein MraZ; HAMAP: MraZ; Belongs to the MraZ family. | 0.487 |
| AEF20165.1 | rpoH | Psefu_0179 | Psefu_0180 | Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.602 |
| AEF21974.1 | ftsE | Psefu_2003 | Psefu_0178 | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.560 |
| AEF23787.1 | ftsE | Psefu_3831 | Psefu_0178 | Nickel-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: pst:PSPTO_3251 dipeptide ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.659 |
| ftsE | AEF20160.1 | Psefu_0178 | Psefu_0174 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family. | 0.545 |
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