STRINGSTRING
AEF20189.1 AEF20189.1 AEF20192.1 AEF20192.1 AEF20765.1 AEF20765.1 AEF22162.1 AEF22162.1 AEF20190.1 AEF20190.1 AEF20188.1 AEF20188.1 AEF20187.1 AEF20187.1 AEF20193.1 AEF20193.1 AEF22894.1 AEF22894.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
AEF20189.1KEGG: pmy:Pmen_0177 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria. (283 aa)    
Predicted Functional Partners:
AEF20192.1
UPF0391 membrane protein ytjA; KEGG: pmy:Pmen_0080 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328.
 
    0.821
AEF20765.1
CsbD family protein; PFAM: CsbD-like; KEGG: pmy:Pmen_3602 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.755
AEF22162.1
KEGG: bph:Bphy_0848 CsbD family protein.
 
  
 0.704
AEF20190.1
KEGG: pmy:Pmen_0178 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function DUF2383.
 
  
 0.662
AEF20188.1
Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG: pst:PSPTO_0334 alginate biosynthesis transcriptional regulatory protein AlgB; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core.
       0.550
AEF20187.1
TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold-4; KEGG: psb:Psyr_0264 PAS; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS.
       0.547
AEF20193.1
PFAM: Inhibitor of vertebrate lysozyme; KEGG: pmy:Pmen_0079 hypothetical protein.
  
    0.408
AEF22894.1
PFAM: Protein of unknown function DUF903; KEGG: pfo:Pfl01_3963 hypothetical protein.
  
    0.401
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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