STRINGSTRING
AEF20239.1 AEF20239.1 AEF20241.1 AEF20241.1 AEF20240.1 AEF20240.1 AEF20242.1 AEF20242.1 AEF20243.1 AEF20243.1 AEF20236.1 AEF20236.1 AEF20238.1 AEF20238.1 AEF20235.1 AEF20235.1 AEF20232.1 AEF20232.1 AEF20231.1 AEF20231.1 AEF20237.1 AEF20237.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20239.1TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: pmy:Pmen_2319 hypothetical protein. (155 aa)    
Predicted Functional Partners:
AEF20241.1
KEGG: pap:PSPA7_0149 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal.
 
  
 0.993
AEF20240.1
Type VI secretion protein, VC_A0114 family; KEGG: pag:PLES_00801 hypothetical protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876.
 
  
 0.972
AEF20242.1
Type VI secretion protein IcmF; KEGG: pmy:Pmen_2316 ImcF domain-containing protein; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Domain of unknown function DUF1215.
 
  
 0.966
AEF20243.1
KEGG: pmy:Pmen_2315 hypothetical protein; TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400.
 
  
 0.960
AEF20236.1
Type VI secretion protein, VC_A0107 family; KEGG: pap:PSPA7_0155 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.946
AEF20238.1
TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated (FHA) domain; KEGG: pap:PSPA7_0152 hypothetical protein; SMART: Forkhead-associated (FHA) domain.
 
  
 0.945
AEF20235.1
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: pag:PLES_00851 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877.
 
  
 0.924
AEF20232.1
KEGG: pmy:Pmen_2328 gpW/GP25 family protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25.
 
  
 0.918
AEF20231.1
KEGG: pap:PSPA7_0160 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110.
 
  
 0.911
AEF20237.1
KEGG: pae:PA0082 hypothetical protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal.
 
  
 0.906
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.