STRINGSTRING
AEF20257.1 AEF20257.1 AEF21843.1 AEF21843.1 AEF22926.1 AEF22926.1 AEF23835.1 AEF23835.1 tadA tadA AEF20258.1 AEF20258.1 AEF23592.1 AEF23592.1 AEF20259.1 AEF20259.1 guaA guaA AEF20256.1 AEF20256.1 ybeY ybeY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF20257.1KEGG: pmy:Pmen_4406 hypothetical protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core. (446 aa)    
Predicted Functional Partners:
AEF21843.1
PFAM: Methyladenine glycosylase; KEGG: pmy:Pmen_2960 3-methyladenine DNA glycosylase-like protein.
     
 0.683
AEF22926.1
KEGG: psa:PST_1587 hypothetical protein.
      
 0.677
AEF23835.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: pmy:Pmen_0504 hypothetical protein.
      
 0.677
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.668
AEF20258.1
TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; KEGG: pmy:Pmen_4407 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
  
    0.641
AEF23592.1
Phosphoesterase PA-phosphatase related protein; KEGG: ppu:PP_4813 PAP2 family protein/DedA family protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SNARE associated Golgi protein; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
 
   
 0.574
AEF20259.1
Two component transcriptional regulator PhoB, winged helix family; TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; KEGG: pmy:Pmen_4408 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
  
  
 0.546
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.520
AEF20256.1
KEGG: pmy:Pmen_4405 hypothetical protein.
       0.497
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.464
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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