STRINGSTRING
AEF20268.1 AEF20268.1 recG recG AEF20266.1 AEF20266.1 katG katG AEF21643.1 AEF21643.1 AEF24117.1 AEF24117.1 AEF20535.1 AEF20535.1 AEF20270.1 AEF20270.1 AEF20271.1 AEF20271.1 AEF20269.1 AEF20269.1 AEF23935.1 AEF23935.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEF20268.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pmy:Pmen_4396 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
 0.812
AEF20266.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: pmy:Pmen_4398 putative signal transduction protein.
 
     0.653
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.611
AEF21643.1
TIGRFAM: Alkyl hydroperoxide reductase, subunit F; KEGG: pae:PA0140 alkyl hydroperoxide reductase subunit F; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.603
AEF24117.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pap:PSPA7_5724 putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.561
AEF20535.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pfl:PFL_5204 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.560
AEF20270.1
KEGG: avn:Avin_10620 TonB system transport protein ExbD; TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR.
       0.557
AEF20271.1
tonB-system energizer ExbB; KEGG: pfl:PFL_6067 TonB system transport protein ExbB; TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel.
       0.557
AEF20269.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: psp:PSPPH_0191 ferric siderophore transporter, periplasmic energy transduction protein TonB.
       0.553
AEF23935.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hse:Hsero_0145 LysR family transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.541
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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