STRINGSTRING
AEF20281.1 AEF20281.1 AEF21841.1 AEF21841.1 AEF20282.1 AEF20282.1 AEF23076.1 AEF23076.1 AEF21924.1 AEF21924.1 AEF22081.1 AEF22081.1 AEF20283.1 AEF20283.1 AEF20284.1 AEF20284.1 AEF20285.1 AEF20285.1 metXS metXS AEF21490.1 AEF21490.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20281.1KEGG: pag:PLES_03821 hypothetical protein. (107 aa)    
Predicted Functional Partners:
AEF21841.1
KEGG: pmy:Pmen_2963 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.714
AEF20282.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.690
AEF23076.1
PFAM: Type IV pilus assembly PilZ; KEGG: pap:PSPA7_1777 type IV pilus assembly protein PilZ.
  
     0.615
AEF21924.1
CheW domain protein; KEGG: pmy:Pmen_2797 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
  
     0.597
AEF22081.1
PFAM: Type IV pilus assembly PilZ; KEGG: pmy:Pmen_1928 type IV pilus assembly PilZ.
  
     0.521
AEF20283.1
Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.494
AEF20284.1
KEGG: pmy:Pmen_4157 hypothetical protein.
       0.494
AEF20285.1
KEGG: pmy:Pmen_4156 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW.
       0.494
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.494
AEF21490.1
KEGG: pmy:Pmen_2985 type IV pilus assembly PilZ.
  
     0.475
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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