STRINGSTRING
AEF20284.1 AEF20284.1 AEF20285.1 AEF20285.1 AEF20283.1 AEF20283.1 metXS metXS AEF20691.1 AEF20691.1 AEF20282.1 AEF20282.1 AEF22835.1 AEF22835.1 AEF20287.1 AEF20287.1 AEF20548.1 AEF20548.1 AEF22832.1 AEF22832.1 AEF20289.1 AEF20289.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20284.1KEGG: pmy:Pmen_4157 hypothetical protein. (134 aa)    
Predicted Functional Partners:
AEF20285.1
KEGG: pmy:Pmen_4156 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW.
     0.947
AEF20283.1
Nucleoside-triphosphatase rdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
    0.909
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.806
AEF20691.1
KEGG: pmy:Pmen_0249 cytochrome c5-like protein.
  
     0.654
AEF20282.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.614
AEF22835.1
FixH family protein; PFAM: FixH; KEGG: pmy:Pmen_2609 hypothetical protein.
  
     0.596
AEF20287.1
KEGG: pmy:Pmen_4154 GTPase (dynamin-related)-like protein.
       0.583
AEF20548.1
KEGG: pfl:PFL_0339 hypothetical protein.
  
     0.575
AEF22832.1
KEGG: pmy:Pmen_2606 Cbb3-type cytochrome oxidase component.
  
     0.529
AEF20289.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pag:PLES_03901 putative YGGT family protein.
 
     0.527
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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