STRINGSTRING
AEF20345.1 AEF20345.1 AEF20851.1 AEF20851.1 AEF20849.1 AEF20849.1 AEF24073.1 AEF24073.1 AEF20850.1 AEF20850.1 AEF24079.1 AEF24079.1 AEF20809.1 AEF20809.1 AEF21870.1 AEF21870.1 AEF23354.1 AEF23354.1 AEF23758.1 AEF23758.1 AEF23504.1 AEF23504.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20345.1Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pfo:Pfl01_5409 TetR family transcriptional regulator. (207 aa)    
Predicted Functional Partners:
AEF20851.1
KEGG: pmy:Pmen_0981 hypothetical protein.
  
     0.753
AEF20849.1
KEGG: pmy:Pmen_0979 hypothetical protein.
  
     0.752
AEF24073.1
PFAM: Metal-dependent hydrolase HDOD; KEGG: pmy:Pmen_0623 HDOD.
  
     0.740
AEF20850.1
KEGG: pmy:Pmen_0980 hypothetical protein.
  
     0.731
AEF24079.1
Putative sensor with HAMP domain; PFAM: HAMP linker domain; KEGG: pmy:Pmen_0617 hypothetical protein.
  
     0.692
AEF20809.1
Protein of unknown function UPF0259; PFAM: Uncharacterised protein family UPF0259; KEGG: psa:PST_3708 hypothetical protein.
  
    0.652
AEF21870.1
KEGG: ppu:PP_1399 hypothetical protein.
  
  
 0.652
AEF23354.1
KEGG: pmy:Pmen_3671 hypothetical protein.
  
 
   0.652
AEF23758.1
KEGG: pfl:PFL_1562 putative lipoprotein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001.
  
     0.609
AEF23504.1
PFAM: Protein of unknown function DUF481; KEGG: pmy:Pmen_0944 hypothetical protein.
  
     0.595
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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