STRINGSTRING
AEF20508.1 AEF20508.1 AEF20507.1 AEF20507.1 AEF24079.1 AEF24079.1 AEF20860.1 AEF20860.1 cmoM cmoM AEF23084.1 AEF23084.1 AEF22739.1 AEF22739.1 AEF20671.1 AEF20671.1 AEF20851.1 AEF20851.1 AEF20849.1 AEF20849.1 AEF20510.1 AEF20510.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20508.1KEGG: psb:Psyr_0640 putative lipoprotein. (205 aa)    
Predicted Functional Partners:
AEF20507.1
KEGG: pag:PLES_51781 putative lipoprotein.
 
    
0.771
AEF24079.1
Putative sensor with HAMP domain; PFAM: HAMP linker domain; KEGG: pmy:Pmen_0617 hypothetical protein.
  
     0.770
AEF20860.1
KEGG: pmy:Pmen_0990 hypothetical protein.
  
     0.750
cmoM
Methyltransferase type 11; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
 
     0.748
AEF23084.1
KEGG: pmy:Pmen_2891 Arc domain-containing protein.
  
     0.728
AEF22739.1
PFAM: Protein of unknown function DUF2059; KEGG: pmy:Pmen_1691 hypothetical protein.
  
     0.725
AEF20671.1
KEGG: pmy:Pmen_3850 hypothetical protein.
  
     0.721
AEF20851.1
KEGG: pmy:Pmen_0981 hypothetical protein.
  
     0.714
AEF20849.1
KEGG: pmy:Pmen_0979 hypothetical protein.
  
     0.710
AEF20510.1
KEGG: pfl:PFL_0682 hypothetical protein.
       0.694
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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