STRINGSTRING
AEF20568.1 AEF20568.1 AEF21415.1 AEF21415.1 AEF20566.1 AEF20566.1 AEF20567.1 AEF20567.1 AEF21445.1 AEF21445.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20568.1KEGG: psp:PSPPH_1888 hypothetical protein. (119 aa)    
Predicted Functional Partners:
AEF21415.1
TIGRFAM: Zinc finger, C4 DksA/TraR-type; KEGG: dda:Dd703_2085 transcriptional regulator, TraR/DksA family.
  
    0.816
AEF20566.1
KEGG: pmy:Pmen_3988 hypothetical protein.
  
    0.577
AEF20567.1
KEGG: pmy:Pmen_3983 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
       0.562
AEF21445.1
KEGG: ppw:PputW619_3920 hypothetical protein.
   
    0.538
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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